PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Vun001865
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
Family TCP
Protein Properties Length: 337aa    MW: 37514.9 Da    PI: 7.1348
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PUT-167a-Vigna_unguiculata-9123PU_refplantGDBView CDS
gnl|UG|Vun#S45907915PU_unrefUnigeneView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP1172.4e-36401512111
        TCP   2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssaseceaesssssasnsssg....kaaksaaks 97 
                 g+kdrhsk++T++g+RdRRvRlsa++a++f+d+qd+LG+d++sk+++WL+++ak +i++l++++  ++   +++++++++++ ssg    +++++++++
  Vun001865  40 SGRKDRHSKVYTSKGPRDRRVRLSAHTAIEFYDVQDRLGYDRPSKAVDWLIKKAKSSIDKLAELPPWHP--PTHDEEKQNDAAGSSGivavEQQQEEHHH 137
                689*************************************************************44444..33344444444444447888777777788 PP

        TCP  98 kksqksaasalnla 111
                +++q+s+++  n++
  Vun001865 138 HQQQQSESCGYNFQ 151
                88888888777776 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF036341.2E-3241144IPR005333Transcription factor, TCP
PROSITE profilePS5136932.11242100IPR017887Transcription factor TCP subgroup
Sequence ? help Back to Top
Protein Sequence    Length: 337 aa     Download sequence    Send to blast
XLNQATKHSK HNRGGTLTRV MRSSVGDIVQ VEGGHIVRSS GRKDRHSKVY TSKGPRDRRV  60
RLSAHTAIEF YDVQDRLGYD RPSKAVDWLI KKAKSSIDKL AELPPWHPPT HDEEKQNDAA  120
GSSGIVAVEQ QQEEHHHHQQ QQSESCGYNF QLQRQLGAFI STHVDTDPIN FQTNNSSEDL  180
GLSLHCFQDH PGLINWPSQQ GANQAPPSNE HQIQTLFAGS TPVAFENHYQ RTVTWNNEAT  240
TGDHVSRMGF FLNSHPFLGQ ASASAYAQSE TLQSSFSFPV TSSEHQRPQP VHQPSIFGSR  300
FVFDGLAGFC IPDRIQSVEE NHGVASNRPS SSPSSIH
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_014524399.10.0PREDICTED: transcription factor TCP4-like
TrEMBLA0A0L9V5140.0A0A0L9V514_PHAAN; Uncharacterized protein
TrEMBLA0A0S3SAY20.0A0A0S3SAY2_PHAAN; Uncharacterized protein
STRINGGLYMA06G43721.11e-177(Glycine max)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G15030.39e-47TCP family protein